I like structure 1 slightly more. It's slightly simpler for tools like 
OpenEmbedded to pull the lib5250 and only run autogen.sh inside this to build 
only the lib5250.

But that's only a slight preference.

For my own project, I actually pulled all the files that make up the lib5250, 
put them into one directory and wrote a lib5250.pro file (for Qt's qmake, the 
rest of my project is Qt3.x/Embedded-based).

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